latest
  • Installation
    • Update
  • Usage
    • Synthetic data reconstruction
      • 2D Siemens star
        • Generate data for a siemens star
        • Phase retreival by a 1-step method (CTF, MultiPaganin)
        • Iterative reconstruction
      • 3D ALD
        • Generate data for a 3D ALD synthetic sample
        • Phase retreival by a 1-step method (CTF, MultiPaganin)
        • Iterative reconstruction with illumination retrieval
        • Reconstruction of the 3D ALD sample with probe retrieval
    • Experimental data reconstruction
      • 2D Siemens star
        • Phase retreival by a 1-step method (CTF, MultiPaganin)
        • Iterative reconstruction with illumination retrieval
    • Holotomography reconstruction with coded apertures
      • Synthetic 2D Siemens star
        • Generate data for a siemens star with coded apertures
        • Reconstruction with an iterative scheme
      • Synthetic 3D ALD
        • Generate data for a 3d ALD sample star with coded apertures
        • Plot
        • Rec iterative
        • Joint phase retrieval and tomography reconstruction using the reprojection method
        • Rec tomo
  • API reference
    • holotomocupy.chunking
      • gpu_batch()
    • holotomocupy.holo
    • holotomocupy.magnification
    • holotomocupy.proc
      • dai_yuan()
    • holotomocupy.recon_methods
    • holotomocupy.shift
    • holotomocupy.tomo
    • holotomocupy.utils
      • mshow()
      • mshow_complex()
      • mshow_polar()
      • read_tiff()
      • write_tiff()
  • Credits
    • Citations
    • References
holotomocupy
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